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Scientific software

AI Lab

Software for assay planning, sequence analysis, laboratory training, and QC logging.

Methods and systems

Laboratory context

  • qPCR
  • NGS
  • Clinical genomics
  • Sequencing workflows
  • Assay validation
  • Sequence analysis
  • Quality control

Projects

Laboratory software

01

active

AssayIndex

Search and compare laboratory tests across source catalogs, with downloadable records and clear source status.

02

prototype

ARUP-VistA Result Interface

Prototype HL7 middleware that maps sendout results, reconciles them against a simulated LIS, and sends mismatches to review.

03

active

Interactive Multivariable qPCR Simulator

Interactive qPCR simulator for testing how assay inputs change amplification curves.

04

active

Blood Culture Simulator

Browser training game for practicing the Gram-stain sequence and early organism identification from positive blood cultures.

Public testing

AssayIndex

Search and compare laboratory tests across source catalogs, with downloadable records and clear source status.

I built AssayIndex for my Coursera app-building course thesis. It contains public catalog information, not patient data or PHI.